Browsing German Conference on Bioinformatics by Title

2D projections of RNA folding landscapes

Lorenz, Rony; Flamm, Christoph; Hofacker, Ivo L.

11-20

Ab initio prediction of molecular fragments from tandem mass spectrometry data

Heinonen, Markus; Rantanen, Ari; Mielikäinen, Taneli; Pitkänen, Esa; Kokkonen, Juha; Rousu, Juho

40-53

Aligning protein structures using distance matrices and combinatorial optimization

Wohlers, Inken; Petzold, Lars; Domingues, Francisco S.; Klau, Gunnar W.

33-43

Annotation-based distance measures for patient subgroup discovery in clinical microarray studies

Lottaz, Claudio; Toedling, Joern; Spang, Rainer

75-91

An application of latent topic document analysis to large-scale proteomics databases

Klie, Sebastian; Martens, Lennart; Vizcaino, Juan Antonio; Cote, Richard; Jones, Phil; Apweiler, Rolf; Hinneburg, Alexander; Hermjakob, Henning

174-184

Are we overestimating the number of cell-cycling genes? The impact of background models for time series data

Futschik, Matthias E.; Herzel, Hanspeter

2-14

Automated bond order assignment as an optimization problem

Dehof, Anna Katharina; Rurainski, Alexander; Lenhof, Hans -Peter; Hildebrandt, Andreas

201-209

Blockclust: efficient clustering and classification of non-coding rnas from short Read RNA-seq profiles

Videm, Pavankumar; Rose, Dominic; Costa, Fabrizio; Backofen, Rolf

1-22

CASOP GS: computing intervention strategies targeted at production improvement in genome-scale metabolic networks

Bohl, Katrin; Figueiredo, Luís F. de; Hädicke, Oliver; Klamt, Steffen; Kost, Christian; Schuster, Stefan; Kaleta, Christoph

71-80

Characterization of protein interactions

Küffner, Robert; Duchrow, Timo; Fundel, Kartin; Zimmer, Ralf

64-73

Characterizing metagenomic novelty with unexplained protein domain hits

Lingner, Thomas; Meinicke, Peter

69-78

Classifying permanent and transient protein interactions

Kottha, Samatha; Schroeder, Michael

54-63

Combining secondary structure element alignment and profile-profile alignment for fold recognition

Gewehr, Jan E.; Öhsen, Niklas von; Zimmer, Ralf

141-148

Combining sequence information with T-coffee

Notredame, Cedric

103-103

Comparative analysis of cyclic sequences: Viroids and other small circular RNAs

Mosig, Axel; Hofacker, Ivo L.; Stadler, Peter F.

93-102

Comparative generalized logic modeling reveals differential gene interactions during cell cycle exit in Drosophila Wing Development

Song, Mingzhou (Jeo); Hong, Chung -Chien; Zhang, Yang; Buttitta, Laura; Edgar, Bruce A.

143-152

Comparative identification of differential interactions from trajectories of dynamic biological networks

Ouyang, Zhengyu; Song, Mingzhou (Joe)

163-172

A Comparative Study of Robust Feature Detectors for 2D Electrophoresis Gel Image Registration

Möller, Birgit; Greß, Oliver; Posch, Stefan

138-147

Comparison of centralities for biological networks

Koschützki, Dirk; Schreiber, Falk

199-206

Comparison of human protein-protein interaction maps

Futschik, Matthias E.; Chaurasia, Gautam; Wanker, Erich; Herzel, Hanspeter

21-32

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