S07 - Visualisation of Large and Unstructured Data Sets
Visualisation of Large and Unstructured Data Sets
Hans Hagen, Martin Hering-Bertram, Christoph Garth (Eds.)
GI-Edition - Lecture Notes in Informatics (LNI), S-7
Bonner Köllen Verlag 2007
ISSN 1614-3213
ISBN 3-88579-441-7
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- TextdokumentPointcloudxplore 2: visual exploration of 3D gene expression(Visualization of large and unstructured data sets, 2008) Rübel, O.; Weber, G. H.; Huang, M. -Y.; Bethel, E. W.; Keränen, S. V. E.; Fowlkes, C. C.; Luengo Hendriks, C. L.; DePace, A. H.; Simirenko, L.; Eisen, M. B.; Biggin, M. D.; Hagen, Hans; Malik, J.; Knowles, D. W.; Hamann, B.To better understand how developmental regulatory networks are defined in the genome sequence, the Berkeley Drosophila Transcription Network Project (BD- NTP) has developed a suite of methods to describe 3D gene expression data, i.e., the output of the network at cellular resolution for multiple time points. To allow researchers to explore these novel data sets we have developed PointCloudXplore (PCX).
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- TextdokumentGPU accelerated gesture detection for real time interaction(Visualization of large and unstructured data sets, 2008) Bierz, T.; Ebert, A.; Meyer, J.Over the past years, the interaction between humans and computers (HCI) evolved to one of the most important research topics in computer science. Therefore, finding a way for an intuitive, easy and affordable interaction is the main challenge. Optical markerless tracking using consumer hardware can satisfy these problems. However, in order to be able to interact in an efficient way, the tracking and furthermore the interaction must be handled in real time. This leads to efficient use of current GPUs in order to speed up the tracking and furthermore the gesture recognition. Involving these issues, an approach for an implementation and system will be presented in the following paper.
- TextdokumentA Survey of Implicit Surface Rendering Methods, and a Proposal for a Common Sampling Framework(Visualization of large and unstructured data sets, 2008) Knoll, AloisWe consider several applications of implicit surfaces in visualization, and methods for rendering them. In particular we focus on geometry processing techniques for mesh extraction; and ray casting methods for direct rendering of implicits. Given that both methods rely on sampling the implicit function in question, we design a soft- ware framework that could accomodate both algorithms. We conclude by evaluating the time complexity and performance of existing systems, and discuss the long-term potential of both methods for rendering and computational goals.
- TextdokumentFrontmatter(Visualization of large and unstructured data sets, 2008)
- TextdokumentFinite elasto-plasto-dynamics a challenges & solutions(Visualization of large and unstructured data sets, 2008) Mohr, R.; Menzel, A.; Steinmann, P.In this contribution, we deal with time-stepping schemes for geometrically nonlinear multiplicative elasto-plasto-dynamics. Thereby, the approximation in space as well as in time rely both on a Finite Element approach, providing a general framework which conceptually includes also higher-order schemes. In this context, the algorithmic conservation properties of the related integrators strongly depend on the numerical computation of time integrals, particularly, if plastic deformations are involved. However, the application of adequate quadrature rules enables a fulfilment of physically motivated balance laws and, consequently, the consistent integration of finite elasto-plasto-dynamics. Using exemplarily linear Finite Elements in time, the resulting integration schemes are analysed regarding the obtained conservation properties and assessed in comparison to classical time-stepping schemes which commonly adopt a time-discretisation procedure based on Finite Differences. 88 On the one hand, computational modelling of materials and structures often demands the incorporation of inelastic and dynamic effects. On the other hand, the performance of classical time integration schemes for structural dynamics, as for instance developed in [HHT77, New59], is strongly restricted when dealing with highly nonlinear systems. In a nonlinear setting, advanced numerical techniques are required to satisfy the classical balance laws as for instance balance of linear and angular momentum or the classical laws of thermodynamics. Nowadays, energy and momentum conserving time integrators for dynamical systems, like multibody systems or elasto-dynamics, are well-established in the computational dynamics community, compare e.g. [BB99, BBT01a, BBT01b, Gonz00, KC99, ST92]. In contrast to the commonly used time discretisation based on Finite Differences, one-step implicit integration algorithms relying on Finite Elements in space and time were developed, for instance, in Betsch and Steinmann [BS00a, BS00b, BS01]. Therein, conservation of energy and angular momentum have been shown to be closely related to quadrature formulas required for numerical integration in time. Furthermore, specific algorithmic energy conserving schemes for hyperelastic materials can be based on the introduction of an enhanced stress tensor for time shape functions of arbitrary order, compare Gross et al. [GBS05]. However, most of the proposed approaches are restricted to conservative dynamical systems. Nevertheless, the consideration of plastic deformations in a dynamical framework, involving dissipation effects, is of cardinal importance for various applications in engineering. In the last years, notable contributions dealing with finite elasto-plasto-dynamics have been published by Meng and Laursen [ML02a, ML02b], Noels et al. [NSP06] and Armero [Arm05, Arm06, AZ06]. In this contribution, we follow the concepts which have been proposed for hyperelasticity in [BS01, GBS05] and pickup the general framework of Galerkin methods in space and time, developing integrators for finite multiplicative elasto-plasto-dynamics with pre-defined conservation properties, compare Mohr et al. [MMS06a, MMS07c, MMS07a, MMS07b]. By means of a representative numerical example, the excellent performance of the resulting schemes, which base on linear Finite Elements in time combined with different quadrature rules, will be demonstrated and compared with the performance of well-accepted standard integrators. 2 Semi-Discrete Dynamics To set the stage, we start with some basic notation of geometrically nonlinear continuum mechanics. First, the nonlinear deformation map $φ$(X, t) : B0 $\times $[0, T ] $\rightarrow $Bt shall be
- TextdokumentOn the modification of phonon tracing(Visualization of large and unstructured data sets, 2008) Deines, E.; Michel, F.Phonon tracing is a geometric approach estimating acoustics in closed rooms. This work contains discussions of possible refinements and extensions of the algorithm. In computer graphics exist numerous level-of-detail approaches decreasing the representation details of objects in order to speed up computations and rendering of virtual scenes. Different ideas for the realization of a level-of-detail approach in acoustics are presented. For this purpose the phonon tracing algorithm has to be modified. With these modifications the room impulse response can be calculated with respect to the user requirements on calculation time and accuracy.
- TextdokumentA framework for the visualization of brain structures(Visualization of large and unstructured data sets, 2008) Thelen, S.; Bierz, T.; Müller, B.; Hagen, Hans; Ebert, A.; Friauf, E.; Meyer, J.Nowadays biologists investigate different causes for deafness. One reason is a damage in a particular region of the auditory brain stem. Anatomical differences were discovered when investigating brain slices of different laboratory mice. However, these slices are only a two dimensional representation of a part of the brain. The arising question was how these differences of structure affect the three dimensional representation of this region. Therefore, an interdisciplinary framework was developed, which allows even unexperienced users to investigate and compare these regions.
- TextdokumentComparative tensor visualisation within the framework of consistent time-stepping schemes(Visualization of large and unstructured data sets, 2008) Mohr, R.; Bobach, T.; Hijazi, Y.; Reis, G.; Steinmann, P.; Hagen, H.Nowadays, the design of so-called consistent time-stepping schemes that basically feature a physically correct time integration, is still a state-of-the-art topic in the area of numerical mechanics. Within the proposed framework for finite elastoplasto-dynamics, the spatial as well as the time discretisation rely both on a Finite Element approach and the resulting algorithmic conservation properties have been shown to be closely related to quadrature formulas that are required for the calculation of time-integrals. Thereby, consistent integration schemes, which allow a superior numerical performance, have been developed based on the introduction of an enhanced algorithmic stress tensor, compare [MMS06]-[MMS07c]. In this contribution, the influence of this consistent stress enhancement, representing a modified time quadrature rule, is analysed for the first time based on the spatial distribution of the tensor-valued difference between the standard quadrature rule, relying on a specific evaluation of the well-known continuum stresses, and the favoured nonstandard quadrature rule, involving the mentioned enhanced algorithmic stresses. This comparative analysis is carried out using several visualisation tools tailored to set apart spatial and temporal patterns that allow to deduce the influence of both step size and material constants on the stress enhancement. The resulting visualisations indeed confirm the physical intuition by pointing out locations where interesting changes happen in the data.
- TextdokumentSurvey of Techniques for Data-dependent Triangulations(Visualization of large and unstructured data sets, 2008) Lehner, B.; Umlauf, G.; Hamann, B.We present a survey of different techniques to approximate a color image using a piecewise linear interpolation induced by a triangulation of the image domain. We also include a detailed description of a method we designed. We give a short overview of possible applications and extentions.